Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RAM_RS00240 | Not Available | Positive | 49798 - 50589 | 27971.9 |
| hypothetical protein | RAM_RS00245 | Not Available | Positive | 50577 - 51218 | 22860.0 |
| effector-associated constant component eacc1 | RAM_RS00250 | Not Available | Positive | 51319 - 51636 | 11302.4 |
| stk1 family pasta domain-containing ser/thr kinase | RAM_RS00255 | Not Available | Negative | 51697 - 53673 | 70722.6 |
| serine/threonine-protein kinase | RAM_RS00260 | Not Available | Negative | 53670 - 55016 | 47367.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | RAM_RS00265 | Not Available | Negative | 55020 - 56489 | 51382.0 |
| ftsw/roda/spove family cell cycle protein | RAM_RS00270 | Not Available | Negative | 56486 - 57973 | 52602.5 |
| pp2c family protein-serine/threonine phosphatase | RAM_RS00275 | Not Available | Negative | 57973 - 59370 | 48984.7 |
| fha domain-containing protein fhab | RAM_RS00280 | Not Available | Negative | 59367 - 59828 | 16975.8 |
| duf3662 and fha domain-containing protein | RAM_RS00285 | Not Available | Negative | 59929 - 61164 | 43756.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
