Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | RAM_RS33575 | Not Available | Positive | 7357681 - 7358127 | 15913.9 |
| hypothetical protein | RAM_RS33580 | Not Available | Positive | 7358155 - 7358736 | 21146.8 |
| uma2 family endonuclease | RAM_RS33585 | Not Available | Negative | 7358743 - 7359312 | 20728.7 |
| translation elongation factor 4 | RAM_RS33590 | Not Available | Negative | 7359463 - 7361313 | 68235.1 |
| class i sam-dependent methyltransferase | RAM_RS33595 | Not Available | Positive | 7361429 - 7362049 | 21750.0 |
| voc family protein | RAM_RS33600 | Not Available | Negative | 7362046 - 7362420 | 13509.2 |
| eama family transporter | RAM_RS33605 | Not Available | Negative | 7362444 - 7363307 | 29595.0 |
| 30s ribosomal protein s20 | RAM_RS33610 | Not Available | Positive | 7363640 - 7363900 | 9376.39 |
| dna polymerase iii subunit delta | RAM_RS33615 | Not Available | Negative | 7364133 - 7365113 | 34059.8 |
| threonine synthase | RAM_RS33620 | Not Available | Positive | 7365407 - 7366672 | 44815.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
