Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | RAM_RS32015 | Not Available | Positive | 7042252 - 7043001 | 25908.3 |
| acetoacetate decarboxylase | RAM_RS32020 | Not Available | Positive | 7042998 - 7043744 | 27436.0 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RAM_RS32025 | Not Available | Positive | 7043741 - 7044667 | 33154.4 |
| acyl-coa dehydrogenase family protein | RAM_RS32030 | Not Available | Positive | 7044669 - 7045865 | 43918.6 |
| lcp family protein | RAM_RS32035 | Not Available | Negative | 7045870 - 7047099 | 41320.9 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS32040 | Not Available | Negative | 7047307 - 7048050 | 25782.3 |
| sigma-70 family rna polymerase sigma factor | RAM_RS32045 | Not Available | Positive | 7048090 - 7049127 | 37988.1 |
| whib family transcriptional regulator | RAM_RS32050 | Not Available | Negative | 7049265 - 7049528 | 9374.08 |
| rna polymerase sigma factor | RAM_RS32055 | Not Available | Positive | 7050047 - 7050535 | 18151.7 |
| sigma-70 family rna polymerase sigma factor | RAM_RS32060 | Not Available | Positive | 7050682 - 7051278 | 21608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
