Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | RAM_RS31765 | Not Available | Negative | 6992970 - 6994334 | 49061.4 |
| polyribonucleotide nucleotidyltransferase | RAM_RS31770 | Not Available | Negative | 6994421 - 6996682 | 80189.8 |
| 30s ribosomal protein s15 | RAM_RS31775 | Not Available | Negative | 6996930 - 6997199 | 10292.7 |
| rna 2',3'-cyclic phosphodiesterase | RAM_RS31780 | Not Available | Negative | 6997343 - 6997846 | 18173.6 |
| helix-turn-helix domain-containing protein | RAM_RS31785 | Not Available | Negative | 6997846 - 6998319 | 17434.1 |
| bifunctional riboflavin kinase/fad synthetase | RAM_RS31790 | Not Available | Negative | 6998399 - 6999382 | 35477.0 |
| trna pseudouridine(55) synthase trub | RAM_RS31795 | Not Available | Negative | 6999410 - 7000315 | 31677.0 |
| gnat family n-acetyltransferase | RAM_RS31800 | Not Available | Positive | 7000380 - 7000844 | 17017.5 |
| voc family protein | RAM_RS31805 | Not Available | Positive | 7000864 - 7001241 | 13448.8 |
| mfs transporter | RAM_RS31810 | Not Available | Negative | 7001242 - 7002564 | 46086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
