Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | RAM_RS31080 | Not Available | Negative | 6836027 - 6836437 | 14848.8 |
| hypothetical protein | RAM_RS31085 | Not Available | Negative | 6836462 - 6836983 | 19199.4 |
| rna polymerase subunit sigma-70 | RAM_RS31090 | Not Available | Negative | 6837787 - 6838761 | 35594.6 |
| ppox class f420-dependent oxidoreductase | RAM_RS31095 | Not Available | Positive | 6838850 - 6839320 | 17001.1 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS31100 | Not Available | Positive | 6839503 - 6840711 | 42147.7 |
| marr family transcriptional regulator | RAM_RS31105 | Not Available | Positive | 6840859 - 6841728 | 30412.5 |
| esx secretion-associated protein espg | RAM_RS31110 | Not Available | Negative | 6841789 - 6842487 | 25239.2 |
| hypothetical protein | RAM_RS31115 | Not Available | Negative | 6842552 - 6843841 | 44413.7 |
| duf3558 domain-containing protein | RAM_RS31120 | Not Available | Negative | 6843841 - 6844482 | 21491.5 |
| hypothetical protein | RAM_RS31125 | Not Available | Negative | 6844479 - 6844904 | 14796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
