Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | RAM_RS30075 | Not Available | Positive | 6624107 - 6624838 | 26449.8 |
| histidine kinase | RAM_RS30080 | Not Available | Negative | 6624780 - 6625769 | 34765.0 |
| luxr c-terminal-related transcriptional regulator | RAM_RS30085 | Not Available | Positive | 6625792 - 6626370 | 19976.3 |
| hypothetical protein | RAM_RS30090 | Not Available | Positive | 6626425 - 6626853 | 15457.5 |
| right-handed parallel beta-helix repeat-containing protein | RAM_RS30095 | Not Available | Positive | 6626950 - 6628221 | 43824.6 |
| tetr/acrr family transcriptional regulator | RAM_RS30100 | Not Available | Negative | 6628211 - 6628828 | 22985.8 |
| msmeg_1061 family fmn-dependent ppox-type flavoprotein | RAM_RS30105 | Not Available | Positive | 6628885 - 6629505 | 22621.1 |
| pdr/vanb family oxidoreductase | RAM_RS30110 | Not Available | Positive | 6629507 - 6630388 | 31468.4 |
| duf4184 family protein | RAM_RS30115 | Not Available | Negative | 6630362 - 6631099 | 25946.0 |
| helix-turn-helix domain-containing protein | RAM_RS30120 | Not Available | Positive | 6631182 - 6632057 | 31862.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
