Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase 8 family protein | RAM_RS30025 | Not Available | Negative | 6612265 - 6614637 | 83129.0 |
| aldehyde dehydrogenase (nadp(+)) | RAM_RS30030 | Not Available | Negative | 6614945 - 6616399 | 50583.9 |
| hypothetical protein | RAM_RS30035 | Not Available | Negative | 6616415 - 6617542 | 39337.6 |
| glucarate dehydratase family protein | RAM_RS30040 | Not Available | Negative | 6617547 - 6618803 | 45267.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | RAM_RS30045 | Not Available | Negative | 6618803 - 6619738 | 32432.9 |
| sodium:solute symporter family protein | RAM_RS30050 | Not Available | Negative | 6619788 - 6621296 | 54493.6 |
| iclr family transcriptional regulator | RAM_RS30055 | Not Available | Positive | 6621450 - 6622259 | 29025.5 |
| nad-dependent epimerase/dehydratase family protein | RAM_RS30060 | Not Available | Positive | 6622283 - 6623089 | 28394.7 |
| clp protease n-terminal domain-containing protein | RAM_RS30065 | Not Available | Negative | 6623125 - 6623787 | 23587.8 |
| helix-turn-helix domain-containing protein | RAM_RS30070 | Not Available | Negative | 6623787 - 6623996 | 7861.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
