Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | RAM_RS29975 | Not Available | Negative | 6601342 - 6601851 | 18335.1 |
| swim zinc finger family protein | RAM_RS29980 | Not Available | Positive | 6602018 - 6603325 | 46316.1 |
| duf5691 domain-containing protein | RAM_RS29985 | Not Available | Positive | 6603366 - 6604751 | 49987.1 |
| atp-binding protein | RAM_RS29990 | Not Available | Positive | 6604748 - 6605836 | 38687.1 |
| duf5682 family protein | RAM_RS29995 | Not Available | Positive | 6605833 - 6608016 | 77577.6 |
| vwa domain-containing protein | RAM_RS30000 | Not Available | Positive | 6608052 - 6609215 | 41798.6 |
| ribosomal protein bl36 | RAM_RS30005 | Not Available | Positive | 6609292 - 6609414 | 4473.57 |
| voc family protein | RAM_RS30010 | Not Available | Negative | 6609652 - 6610020 | 12705.8 |
| winged helix-turn-helix transcriptional regulator | RAM_RS30015 | Not Available | Positive | 6610109 - 6610738 | 22850.4 |
| flavin-containing monooxygenase | RAM_RS30020 | Not Available | Negative | 6610745 - 6612193 | 52916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
