Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator | RAM_RS29735 | Not Available | Positive | 6556587 - 6558182 | 59316.4 |
| helix-turn-helix domain-containing protein | RAM_RS29740 | Not Available | Positive | 6558197 - 6558409 | 8088.66 |
| hypothetical protein | RAM_RS29745 | Not Available | Positive | 6558504 - 6558974 | 18005.1 |
| tyrosine-type recombinase/integrase | RAM_RS29750 | Not Available | Positive | 6558974 - 6559813 | 31214.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | RAM_RS29755 | Not Available | Negative | 6559851 - 6561212 | 48574.1 |
| hypothetical protein | RAM_RS29760 | Not Available | Positive | 6561318 - 6561755 | 15788.9 |
| hypothetical protein | RAM_RS29765 | Not Available | Positive | 6561785 - 6562195 | 13664.7 |
| l,d-transpeptidase | RAM_RS29770 | Not Available | Negative | 6562150 - 6562587 | 15312.3 |
| hypothetical protein | RAM_RS29775 | Not Available | Negative | 6562666 - 6563571 | 31726.7 |
| hypothetical protein | RAM_RS29780 | Not Available | Positive | 6563694 - 6563999 | 10834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
