Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein crga | RAM_RS00190 | Not Available | Negative | 41373 - 41639 | 9837.51 |
| class e sortase | RAM_RS00195 | Not Available | Positive | 41880 - 42938 | 37705.6 |
| hypothetical protein | RAM_RS49505 | Not Available | Positive | 42938 - 43093 | 5927.62 |
| sco5389 family protein | RAM_RS00205 | Not Available | Negative | 43198 - 43590 | 14075.5 |
| abc transporter permease | RAM_RS00210 | Not Available | Negative | 43691 - 44425 | 25467.0 |
| abc transporter atp-binding protein | RAM_RS00215 | Not Available | Negative | 44422 - 45135 | 25643.7 |
| sensor histidine kinase | RAM_RS00220 | Not Available | Positive | 45306 - 47129 | 66745.2 |
| response regulator transcription factor | RAM_RS00225 | Not Available | Positive | 47069 - 47728 | 23205.9 |
| fad-dependent oxidoreductase | RAM_RS00230 | Not Available | Negative | 47725 - 49044 | 47653.4 |
| aminodeoxychorismate/anthranilate synthase component ii | RAM_RS00235 | Not Available | Positive | 49157 - 49801 | 23348.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
