Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | RAM_RS49925 | Not Available | Negative | 6453921 - 6454244 | 11988.4 |
| hypothetical protein | RAM_RS29240 | Not Available | Negative | 6454594 - 6456450 | 66944.8 |
| hypothetical protein | RAM_RS29245 | Not Available | Positive | 6456896 - 6457315 | 14388.9 |
| hypothetical protein | RAM_RS29250 | Not Available | Positive | 6457615 - 6457962 | 12931.3 |
| hypothetical protein | RAM_RS29255 | Not Available | Negative | 6458653 - 6458913 | 9029.06 |
| effector-associated domain 2-containing protein | RAM_RS29260 | Not Available | Positive | 6459157 - 6460197 | 37662.0 |
| integrase core domain-containing protein | RAM_RS29265 | Not Available | Negative | 6460321 - 6460869 | 21103.6 |
| hypothetical protein | RAM_RS29270 | Not Available | Negative | 6460950 - 6461387 | 16606.8 |
| hypothetical protein | RAM_RS48370 | Not Available | Negative | 6461431 - 6461754 | 11885.3 |
| metal-dependent hydrolase | RAM_RS47860 | Not Available | Positive | 6461888 - 6462667 | 27813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
