Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | RAM_RS29185 | Not Available | Positive | 6442310 - 6443341 | 37481.7 |
| hypothetical protein | RAM_RS29190 | Not Available | Positive | 6443983 - 6444237 | 9694.16 |
| type i-e crispr-associated protein cas6/cse3/case | RAM_RS29195 | Not Available | Negative | 6444969 - 6445619 | 24055.8 |
| type i-e crispr-associated protein cas5/casd | RAM_RS29200 | Not Available | Negative | 6445610 - 6446320 | 25675.5 |
| type i-e crispr-associated protein cas7/cse4/casc | RAM_RS29205 | Not Available | Negative | 6446317 - 6447447 | 40295.4 |
| type i-e crispr-associated protein cse2/casb | RAM_RS29210 | Not Available | Negative | 6447444 - 6448040 | 22163.5 |
| type i-e crispr-associated protein cse1/casa | RAM_RS29215 | Not Available | Negative | 6448037 - 6449683 | 60540.5 |
| hypothetical protein | RAM_RS29220 | Not Available | Negative | 6449614 - 6449934 | 11666.6 |
| crispr-associated helicase cas3' | RAM_RS29225 | Not Available | Negative | 6449931 - 6452492 | 92480.6 |
| is3 family transposase | RAM_RS29230 | Not Available | Negative | 6453004 - 6453921 | 33551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
