Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | RAM_RS28990 | Not Available | Negative | 6380551 - 6381372 | 29568.7 |
| carbohydrate abc transporter permease | RAM_RS28995 | Not Available | Negative | 6381369 - 6382313 | 33808.2 |
| laci family dna-binding transcriptional regulator | RAM_RS29000 | Not Available | Positive | 6382484 - 6383515 | 37003.3 |
| substrate-binding domain-containing protein | RAM_RS50565 | Not Available | Negative | 6383679 - 6384533 | 29839.8 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | RAM_RS29010 | Not Available | Positive | 6384984 - 6387164 | 75278.2 |
| glycosyl hydrolase | RAM_RS29015 | Not Available | Positive | 6387282 - 6389021 | 62138.5 |
| metal-dependent hydrolase | RAM_RS50570 | Not Available | Negative | 6388957 - 6390039 | 37764.5 |
| luxr c-terminal-related transcriptional regulator | RAM_RS29020 | Not Available | Negative | 6390363 - 6390560 | 7348.05 |
| laci family dna-binding transcriptional regulator | RAM_RS29025 | Not Available | Positive | 6390826 - 6391824 | 35387.2 |
| nuclear transport factor 2 family protein | RAM_RS29030 | Not Available | Negative | 6391991 - 6392398 | 14706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
