Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 75 protein | RAM_RS02780 | Not Available | Positive | 550671 - 551366 | 23874.8 |
| nucleotide sugar dehydrogenase | RAM_RS02785 | Not Available | Positive | 551573 - 552883 | 46333.7 |
| glycosyltransferase family 4 protein | RAM_RS02790 | Not Available | Positive | 552873 - 554054 | 43512.0 |
| exopolysaccharide biosynthesis protein | RAM_RS02795 | Not Available | Positive | 554164 - 555522 | 47302.6 |
| wzz/fepe/etk n-terminal domain-containing protein | RAM_RS02800 | Not Available | Positive | 555519 - 557474 | 68219.5 |
| asparagine synthase (glutamine-hydrolyzing) | RAM_RS02805 | Not Available | Positive | 557517 - 559427 | 69660.5 |
| bi-domain-containing oxidoreductase | RAM_RS02810 | Not Available | Positive | 559424 - 561601 | 77141.6 |
| heparinase ii/iii family protein | RAM_RS02815 | Not Available | Positive | 561699 - 563831 | 75921.4 |
| right-handed parallel beta-helix repeat-containing protein | RAM_RS02820 | Not Available | Positive | 563841 - 565367 | 53937.2 |
| membrane protein | RAM_RS02825 | Not Available | Positive | 565477 - 566664 | 42052.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
