Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | RAM_RS28785 | Not Available | Positive | 6339392 - 6340093 | 25949.2 |
| duf4142 domain-containing protein | RAM_RS28790 | Not Available | Positive | 6340160 - 6340801 | 23200.7 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS28795 | Not Available | Positive | 6340954 - 6341448 | 17436.2 |
| chloride channel protein | RAM_RS28800 | Not Available | Negative | 6341550 - 6343307 | 60791.5 |
| glycoside hydrolase family 15 protein | RAM_RS28805 | Not Available | Positive | 6343610 - 6345418 | 66110.0 |
| spw repeat protein | RAM_RS28810 | Not Available | Negative | 6345572 - 6346012 | 15110.7 |
| phage holin family protein | RAM_RS28815 | Not Available | Positive | 6346402 - 6346785 | 12706.3 |
| duf4383 domain-containing protein | RAM_RS28820 | Not Available | Positive | 6346877 - 6347356 | 17008.0 |
| hypothetical protein | RAM_RS28825 | Not Available | Positive | 6347361 - 6347657 | 10515.5 |
| formate dehydrogenase | RAM_RS28835 | Not Available | Positive | 6347705 - 6350986 | 121257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
