Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | RAM_RS28650 | Not Available | Positive | 6312757 - 6313257 | 18273.4 |
| alpha/beta fold hydrolase | RAM_RS28655 | Not Available | Positive | 6313254 - 6314150 | 33588.0 |
| 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | RAM_RS28660 | Not Available | Positive | 6314150 - 6315079 | 32391.6 |
| metal-dependent hydrolase | RAM_RS48745 | Not Available | Negative | 6315095 - 6315199 | 3514.48 |
| transposase | RAM_RS51170 | Not Available | Positive | 6315522 - 6315884 | 13223.6 |
| cold-shock protein | RAM_RS51175 | Not Available | Negative | 6315839 - 6316558 | 24503.5 |
| metal-dependent hydrolase | RAM_RS51340 | Not Available | Negative | 6316589 - 6316786 | 7186.36 |
| hypothetical protein | RAM_RS50560 | Not Available | Positive | 6317018 - 6317386 | 13484.0 |
| tetr/acrr family transcriptional regulator | RAM_RS28670 | Not Available | Negative | 6317447 - 6318037 | 21557.8 |
| srpbcc domain-containing protein | RAM_RS28675 | Not Available | Positive | 6318127 - 6318645 | 18643.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
