Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | RAM_RS50530 | Not Available | Positive | 6297454 - 6297854 | 15039.9 |
| ycii family protein | RAM_RS28560 | Not Available | Positive | 6298028 - 6298402 | 13432.9 |
| rna polymerase sigma factor | RAM_RS28565 | Not Available | Positive | 6298399 - 6299631 | 44736.9 |
| hypothetical protein | RAM_RS28570 | Not Available | Positive | 6299713 - 6300018 | 11489.4 |
| hypothetical protein | RAM_RS28575 | Not Available | Positive | 6300070 - 6300408 | 11392.2 |
| carboxymuconolactone decarboxylase family protein | RAM_RS28580 | Not Available | Positive | 6300395 - 6300976 | 20702.2 |
| isochorismatase family protein | RAM_RS28585 | Not Available | Positive | 6301223 - 6301807 | 20858.0 |
| nmra family nad(p)-binding protein | RAM_RS50070 | Not Available | Positive | 6301868 - 6302197 | 10863.8 |
| metal-dependent hydrolase | RAM_RS51335 | Not Available | Positive | 6302160 - 6302312 | 5472.72 |
| alpha/beta hydrolase | RAM_RS28595 | Not Available | Negative | 6302539 - 6304074 | 53656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
