Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | RAM_RS28370 | Not Available | Negative | 6256357 - 6257079 | 24362.4 |
| mfs transporter | RAM_RS28375 | Not Available | Negative | 6257475 - 6258908 | 49769.1 |
| tetr/acrr family transcriptional regulator | RAM_RS28380 | Not Available | Positive | 6258988 - 6259575 | 20880.8 |
| helix-turn-helix domain-containing protein | RAM_RS28385 | Not Available | Negative | 6259860 - 6260162 | 10980.1 |
| tigr04141 family sporadically distributed protein | RAM_RS28390 | Not Available | Negative | 6260162 - 6261823 | 60160.0 |
| uma2 family endonuclease | RAM_RS28395 | Not Available | Positive | 6262265 - 6262804 | 19826.0 |
| phosphate abc transporter atp-binding protein | RAM_RS28400 | Not Available | Negative | 6262822 - 6263619 | 28722.7 |
| sortase | RAM_RS28405 | Not Available | Negative | 6263636 - 6264526 | 30231.7 |
| hypothetical protein | RAM_RS28410 | Not Available | Negative | 6264511 - 6265368 | 28484.1 |
| hypothetical protein | RAM_RS28415 | Not Available | Negative | 6265386 - 6266093 | 23592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
