Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | RAM_RS28120 | Not Available | Positive | 6204646 - 6206028 | 48780.7 |
| duf998 domain-containing protein | RAM_RS28125 | Not Available | Positive | 6206085 - 6206708 | 21281.2 |
| glycosyltransferase family 4 protein | RAM_RS28130 | Not Available | Positive | 6206705 - 6208708 | 69852.1 |
| metal-dependent hydrolase | RAM_RS28135 | Not Available | Positive | 6208760 - 6208936 | 6270.27 |
| upf0158 family protein | RAM_RS28140 | Not Available | Positive | 6209099 - 6209569 | 17709.7 |
| hypothetical protein | RAM_RS28145 | Not Available | Negative | 6209612 - 6210778 | 43467.7 |
| hypothetical protein | RAM_RS48325 | Not Available | Negative | 6210775 - 6211149 | 13798.2 |
| ricin domain-containing protein | RAM_RS50500 | Not Available | Negative | 6211440 - 6211562 | 4208.95 |
| hypothetical protein | RAM_RS49460 | Not Available | Positive | 6211568 - 6211840 | 9199.73 |
| tetratricopeptide repeat protein | RAM_RS28160 | Not Available | Positive | 6212266 - 6214758 | 91387.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
