Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | RAM_RS26975 | Not Available | Positive | 5954713 - 5956239 | 52699.4 |
| mdr family mfs transporter | RAM_RS26980 | Not Available | Positive | 5956236 - 5957702 | 50788.2 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS26985 | Not Available | Positive | 5957683 - 5958444 | 25459.2 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS26990 | Not Available | Negative | 5958489 - 5959451 | 33223.5 |
| tetr/acrr family transcriptional regulator | RAM_RS26995 | Not Available | Positive | 5959503 - 5960093 | 20990.1 |
| tetr/acrr family transcriptional regulator | RAM_RS27000 | Not Available | Positive | 5960119 - 5960694 | 20815.9 |
| hypothetical protein | RAM_RS27005 | Not Available | Negative | 5960691 - 5961128 | 15478.2 |
| hypothetical protein | RAM_RS27010 | Not Available | Positive | 5961281 - 5961493 | 7758.04 |
| effector-associated constant component eacc1 | RAM_RS27015 | Not Available | Positive | 5961509 - 5961880 | 13310.9 |
| caspase, eacc1-associated type | RAM_RS27020 | Not Available | Positive | 5961926 - 5963416 | 54027.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
