Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate--coa ligase | RAM_RS02585 | Not Available | Negative | 508105 - 509229 | 38267.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | RAM_RS02590 | Not Available | Negative | 509231 - 510154 | 34085.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | RAM_RS02595 | Not Available | Positive | 510212 - 511888 | 59565.4 |
| m1 family metallopeptidase | RAM_RS02600 | Not Available | Positive | 512010 - 513530 | 54200.8 |
| duf3592 domain-containing protein | RAM_RS02605 | Not Available | Positive | 513553 - 513990 | 15658.9 |
| inositol monophosphatase family protein | RAM_RS02610 | Not Available | Negative | 514286 - 515116 | 28575.9 |
| glycosyltransferase family 4 protein | RAM_RS02615 | Not Available | Positive | 515294 - 516364 | 38033.0 |
| glycosyltransferase family 4 protein | RAM_RS02620 | Not Available | Positive | 516366 - 517469 | 39203.0 |
| afsr/sarp family transcriptional regulator | RAM_RS02625 | Not Available | Positive | 517550 - 518323 | 28360.6 |
| hypothetical protein | RAM_RS02630 | Not Available | Negative | 518305 - 518679 | 12416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
