Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | RAM_RS26595 | Not Available | Negative | 5876777 - 5877844 | 38215.8 |
| holliday junction branch migration protein ruva | RAM_RS26600 | Not Available | Negative | 5877853 - 5878449 | 20268.7 |
| crossover junction endodeoxyribonuclease ruvc | RAM_RS26605 | Not Available | Negative | 5878446 - 5879030 | 20447.9 |
| cupin domain-containing protein | RAM_RS26610 | Not Available | Positive | 5879198 - 5879638 | 15499.3 |
| duf4262 domain-containing protein | RAM_RS26615 | Not Available | Negative | 5879635 - 5880186 | 19683.0 |
| yebc/pmpr family dna-binding transcriptional regulator | RAM_RS26620 | Not Available | Negative | 5880273 - 5881028 | 27025.7 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | RAM_RS26625 | Not Available | Negative | 5881070 - 5881690 | 21782.3 |
| azld domain-containing protein | RAM_RS26630 | Not Available | Negative | 5881803 - 5882123 | 10654.6 |
| azlc family abc transporter permease | RAM_RS26635 | Not Available | Negative | 5882123 - 5882815 | 23952.7 |
| helix-turn-helix domain-containing protein | RAM_RS26640 | Not Available | Positive | 5882884 - 5883447 | 20051.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
