Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein resb | RAM_RS02540 | Not Available | Positive | 500186 - 501781 | 58677.1 |
| c-type cytochrome biogenesis protein ccsb | RAM_RS02545 | Not Available | Positive | 501785 - 502753 | 35141.4 |
| mind/para family protein | RAM_RS02550 | Not Available | Positive | 502829 - 504166 | 47393.5 |
| hypothetical protein | RAM_RS02555 | Not Available | Negative | 504283 - 504468 | 6795.28 |
| bldc family transcriptional regulator | RAM_RS02560 | Not Available | Negative | 504615 - 504827 | 7566.02 |
| lrp/asnc family transcriptional regulator | RAM_RS02565 | Not Available | Positive | 505104 - 505577 | 16512.5 |
| duf4229 domain-containing protein | RAM_RS02570 | Not Available | Positive | 505589 - 505870 | 10089.8 |
| plp-dependent cysteine synthase family protein | RAM_RS02575 | Not Available | Positive | 505867 - 506949 | 39958.1 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | RAM_RS02580 | Not Available | Negative | 506946 - 507818 | 30060.2 |
| hypothetical protein | RAM_RS49535 | Not Available | Negative | 507916 - 508053 | 4694.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
