Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3618 domain-containing protein | RAM_RS26200 | Not Available | Positive | 5787288 - 5787593 | 11169.4 |
| duf4235 domain-containing protein | RAM_RS26205 | Not Available | Positive | 5787590 - 5787841 | 8753.41 |
| stas domain-containing protein | RAM_RS26210 | Not Available | Negative | 5787870 - 5788238 | 12600.3 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS26215 | Not Available | Positive | 5788409 - 5789698 | 45742.0 |
| hypothetical protein | RAM_RS26220 | Not Available | Positive | 5789725 - 5790279 | 19099.4 |
| lysr family transcriptional regulator | RAM_RS26225 | Not Available | Negative | 5790276 - 5791154 | 31559.8 |
| diaminopimelate decarboxylase | RAM_RS26230 | Not Available | Positive | 5791236 - 5792564 | 46214.0 |
| arnt family glycosyltransferase | RAM_RS26235 | Not Available | Positive | 5792605 - 5794098 | 52557.7 |
| alpha-l-fucosidase | RAM_RS26240 | Not Available | Negative | 5794139 - 5796490 | 84321.9 |
| hypothetical protein | RAM_RS26245 | Not Available | Positive | 5796729 - 5796995 | 9199.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
