Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03557 family f420-dependent llm class oxidoreductase | RAM_RS26150 | Not Available | Negative | 5779686 - 5780651 | 34802.1 |
| hypothetical protein | RAM_RS26155 | Not Available | Positive | 5780895 - 5781224 | 12214.3 |
| atp-binding protein | RAM_RS26160 | Not Available | Positive | 5781287 - 5781736 | 15876.0 |
| sigb/sigf/sigg family rna polymerase sigma factor | RAM_RS26165 | Not Available | Positive | 5781733 - 5782524 | 29439.3 |
| cyth and chad domain-containing protein | RAM_RS26170 | Not Available | Negative | 5782556 - 5784073 | 55911.1 |
| hemerythrin domain-containing protein | RAM_RS26175 | Not Available | Positive | 5784198 - 5784719 | 18910.2 |
| gaf and antar domain-containing protein | RAM_RS26180 | Not Available | Positive | 5784761 - 5785561 | 28250.4 |
| hypothetical protein | RAM_RS26185 | Not Available | Negative | 5785640 - 5786113 | 16552.2 |
| srpbcc family protein | RAM_RS26190 | Not Available | Negative | 5786278 - 5786742 | 17573.3 |
| phage holin family protein | RAM_RS26195 | Not Available | Positive | 5786878 - 5787291 | 14177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
