Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RAM_RS26050 | Not Available | Positive | 5757036 - 5758307 | 45721.1 |
| glycoside hydrolase family 6 protein | RAM_RS26055 | Not Available | Negative | 5758724 - 5760544 | 63190.1 |
| cellulase family glycosylhydrolase | RAM_RS26060 | Not Available | Negative | 5760579 - 5762108 | 53346.4 |
| glycoside hydrolase family 48 protein | RAM_RS26065 | Not Available | Negative | 5762119 - 5765037 | 102784.0 |
| laci family dna-binding transcriptional regulator | RAM_RS26070 | Not Available | Negative | 5765549 - 5766544 | 35373.3 |
| abc transporter substrate-binding protein | RAM_RS26075 | Not Available | Positive | 5766794 - 5768098 | 46497.6 |
| carbohydrate abc transporter permease | RAM_RS26080 | Not Available | Positive | 5768103 - 5769092 | 36283.6 |
| carbohydrate abc transporter permease | RAM_RS26085 | Not Available | Positive | 5769089 - 5769961 | 31781.6 |
| gh1 family beta-glucosidase | RAM_RS26090 | Not Available | Positive | 5769958 - 5771370 | 51429.1 |
| ilvd/edd family dehydratase | RAM_RS26095 | Not Available | Positive | 5771517 - 5773283 | 62754.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
