Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine decarboxylase | RAM_RS25850 | Not Available | Negative | 5706148 - 5706507 | 12759.1 |
| type iii plp-dependent enzyme | RAM_RS25855 | Not Available | Negative | 5706500 - 5707654 | 40154.8 |
| glutaminase domain-containing protein | RAM_RS25860 | Not Available | Negative | 5707677 - 5710241 | 91410.8 |
| msmeg_6728 family protein | RAM_RS25865 | Not Available | Negative | 5710599 - 5711075 | 17580.9 |
| duf1883 domain-containing protein | RAM_RS25870 | Not Available | Negative | 5711162 - 5711455 | 10955.5 |
| hypothetical protein | RAM_RS48640 | Not Available | Negative | 5711570 - 5712973 | 44845.9 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS25880 | Not Available | Negative | 5713154 - 5713642 | 17189.1 |
| phenylacetate--coa ligase family protein | RAM_RS25885 | Not Available | Positive | 5713671 - 5715116 | 52758.0 |
| hypothetical protein | RAM_RS25890 | Not Available | Negative | 5715113 - 5717686 | 97594.1 |
| duf4326 domain-containing protein | RAM_RS25895 | Not Available | Negative | 5717733 - 5718041 | 11243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
