Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpx c4-type zinc finger protein | RAM_RS25595 | Not Available | Negative | 5658932 - 5659279 | 12216.6 |
| hypothetical protein | RAM_RS25600 | Not Available | Negative | 5659305 - 5659691 | 14221.9 |
| gdsl-type esterase/lipase family protein | RAM_RS25605 | Not Available | Negative | 5659748 - 5660995 | 42281.4 |
| hypothetical protein | RAM_RS25610 | Not Available | Positive | 5661123 - 5661365 | 8595.46 |
| gh25 family lysozyme | RAM_RS25615 | Not Available | Negative | 5661362 - 5662159 | 27919.4 |
| radical sam protein | RAM_RS25620 | Not Available | Negative | 5662253 - 5663686 | 52836.0 |
| glycosyltransferase | RAM_RS25625 | Not Available | Negative | 5663686 - 5666265 | 95922.4 |
| hypothetical protein | RAM_RS25630 | Not Available | Positive | 5666632 - 5666874 | 8649.48 |
| family 78 glycoside hydrolase catalytic domain | RAM_RS25635 | Not Available | Positive | 5667018 - 5670665 | 127162.0 |
| cytochrome p450 | RAM_RS25640 | Not Available | Negative | 5670708 - 5672015 | 48047.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
