Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | RAM_RS02440 | Not Available | Positive | 481138 - 482694 | 55105.2 |
| redox-sensing transcriptional repressor rex | RAM_RS02445 | Not Available | Positive | 483056 - 483979 | 31735.0 |
| glutamyl-trna reductase | RAM_RS02450 | Not Available | Positive | 484053 - 485360 | 45968.1 |
| hydroxymethylbilane synthase | RAM_RS02455 | Not Available | Positive | 485381 - 486310 | 31710.2 |
| uroporphyrinogen-iii synthase | RAM_RS02460 | Not Available | Positive | 486429 - 487961 | 53491.8 |
| nad-dependent epimerase/dehydratase family protein | RAM_RS02465 | Not Available | Negative | 488014 - 488886 | 30955.9 |
| helix-turn-helix domain-containing protein | RAM_RS02470 | Not Available | Negative | 488883 - 489680 | 28377.4 |
| porphobilinogen synthase | RAM_RS02475 | Not Available | Positive | 489768 - 490739 | 34750.6 |
| hypothetical protein | RAM_RS02480 | Not Available | Positive | 490757 - 491293 | 19519.5 |
| hypothetical protein | RAM_RS02485 | Not Available | Positive | 491290 - 491736 | 15822.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
