Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | RAM_RS25455 | Not Available | Negative | 5629528 - 5630673 | 39397.8 |
| abc transporter permease | RAM_RS25460 | Not Available | Positive | 5630906 - 5631787 | 31303.0 |
| abc transporter substrate-binding protein | RAM_RS25465 | Not Available | Positive | 5631818 - 5632831 | 35061.6 |
| abc transporter atp-binding protein | RAM_RS25470 | Not Available | Positive | 5632833 - 5633660 | 29905.1 |
| atp-binding protein | RAM_RS51305 | Not Available | Negative | 5633692 - 5633817 | 3897.81 |
| metal-dependent hydrolase | RAM_RS25475 | Not Available | Negative | 5633876 - 5634856 | 34048.6 |
| response regulator transcription factor | RAM_RS25480 | Not Available | Negative | 5635048 - 5635719 | 24988.2 |
| duf1996 domain-containing protein | RAM_RS25485 | Not Available | Positive | 5635988 - 5636758 | 27228.7 |
| hypothetical protein | RAM_RS25490 | Not Available | Positive | 5636873 - 5637415 | 18895.8 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS25495 | Not Available | Negative | 5637454 - 5637909 | 16559.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
