Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 16 protein | RAM_RS25405 | Not Available | Negative | 5613481 - 5614338 | 30192.3 |
| endo-1,4-beta-xylanase | RAM_RS25410 | Not Available | Negative | 5614356 - 5615990 | 57881.5 |
| rok family transcriptional regulator | RAM_RS25415 | Not Available | Negative | 5616054 - 5617244 | 40020.2 |
| beta-n-acetylhexosaminidase | RAM_RS25420 | Not Available | Negative | 5617345 - 5618943 | 55864.2 |
| glycosyl hydrolase 2 galactose-binding domain-containing protein | RAM_RS25425 | Not Available | Negative | 5619048 - 5622545 | 121221.0 |
| glycosyl hydrolase family 8 | RAM_RS25430 | Not Available | Positive | 5622857 - 5624695 | 63160.3 |
| sugar phosphate isomerase/epimerase family protein | RAM_RS25435 | Not Available | Positive | 5624720 - 5626078 | 49147.7 |
| sugar phosphate isomerase/epimerase family protein | RAM_RS25440 | Not Available | Positive | 5626075 - 5627115 | 37400.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | RAM_RS25445 | Not Available | Negative | 5627176 - 5628336 | 40561.8 |
| laci family dna-binding transcriptional regulator | RAM_RS25450 | Not Available | Negative | 5628333 - 5629457 | 39765.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
