Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | RAM_RS25360 | Not Available | Positive | 5599527 - 5600939 | 51462.8 |
| tetratricopeptide repeat protein | RAM_RS25365 | Not Available | Positive | 5601422 - 5603836 | 86802.8 |
| tyrosine-type recombinase/integrase | RAM_RS47620 | Not Available | Negative | 5604192 - 5604899 | 26050.5 |
| duf6294 family protein | RAM_RS48625 | Not Available | Negative | 5605199 - 5605678 | 17200.8 |
| hypothetical protein | RAM_RS50425 | Not Available | Negative | 5606315 - 5606569 | 8807.48 |
| effector-associated constant component eacc1 | RAM_RS25385 | Not Available | Positive | 5607004 - 5607384 | 14659.3 |
| caspase family protein | RAM_RS25390 | Not Available | Positive | 5607479 - 5608852 | 48026.2 |
| hypothetical protein | RAM_RS48635 | Not Available | Positive | 5609596 - 5610081 | 17333.4 |
| hypothetical protein | RAM_RS25395 | Not Available | Negative | 5610530 - 5611468 | 33456.1 |
| metallophosphoesterase | RAM_RS25400 | Not Available | Positive | 5611799 - 5613394 | 57236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
