Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paax family transcriptional regulator c-terminal domain-containing protein | RAM_RS25315 | Not Available | Positive | 5588111 - 5589022 | 34529.1 |
| enoyl-coa hydratase/isomerase family protein | RAM_RS25320 | Not Available | Positive | 5589025 - 5589804 | 27408.7 |
| glycosyl hydrolase family 18 protein | RAM_RS25325 | Not Available | Positive | 5589966 - 5592179 | 76052.7 |
| Trna-pro | Not Available | Not Available | Positive | 5592568 - 5592641 | Not Available |
| tyrosine-type recombinase/integrase | RAM_RS25335 | Not Available | Negative | 5594689 - 5595087 | 15285.5 |
| transposase | RAM_RS25340 | Not Available | Positive | 5595156 - 5595479 | 12048.5 |
| is3 family transposase | RAM_RS25345 | Not Available | Positive | 5595479 - 5596393 | 33490.6 |
| hypothetical protein | RAM_RS48620 | Not Available | Positive | 5597088 - 5597354 | 9285.91 |
| duf4062 domain-containing protein | RAM_RS25350 | Not Available | Positive | 5597366 - 5598715 | 49700.9 |
| metal-dependent hydrolase | RAM_RS47615 | Not Available | Negative | 5598621 - 5599501 | 31478.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
