Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RAM_RS25265 | Not Available | Positive | 5575715 - 5576518 | 28946.0 |
| dinb family protein | RAM_RS25270 | Not Available | Positive | 5576598 - 5577083 | 18081.4 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | RAM_RS25275 | Not Available | Negative | 5577070 - 5578368 | 47547.4 |
| methionyl-trna formyltransferase | RAM_RS25280 | Not Available | Positive | 5578482 - 5579426 | 34576.1 |
| hypothetical protein | RAM_RS25285 | Not Available | Negative | 5579431 - 5580426 | 35745.9 |
| alpha-galactosidase | RAM_RS25290 | Not Available | Positive | 5580659 - 5582749 | 77329.0 |
| extracellular solute-binding protein | RAM_RS25295 | Not Available | Positive | 5582862 - 5584133 | 45548.8 |
| carbohydrate abc transporter permease | RAM_RS25300 | Not Available | Positive | 5584115 - 5585080 | 34810.1 |
| carbohydrate abc transporter permease | RAM_RS25305 | Not Available | Positive | 5585077 - 5585898 | 29807.7 |
| abc-f family atp-binding cassette domain-containing protein | RAM_RS25310 | Not Available | Negative | 5586328 - 5587965 | 58327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
