Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | RAM_RS25160 | Not Available | Positive | 5538739 - 5539524 | 27490.3 |
| glycosyl transferase | RAM_RS25165 | Not Available | Positive | 5539620 - 5541431 | 61201.8 |
| duf4397 domain-containing protein | RAM_RS25170 | Not Available | Positive | 5541450 - 5542289 | 27798.5 |
| class f sortase | RAM_RS25175 | Not Available | Positive | 5542279 - 5542887 | 20651.5 |
| llm class flavin-dependent oxidoreductase | RAM_RS25180 | Not Available | Negative | 5542884 - 5543987 | 39938.1 |
| abc transporter substrate-binding protein | RAM_RS25185 | Not Available | Negative | 5543984 - 5544991 | 34926.4 |
| abc transporter atp-binding protein | RAM_RS25190 | Not Available | Negative | 5544978 - 5545682 | 25416.8 |
| abc transporter permease | RAM_RS25195 | Not Available | Negative | 5545667 - 5546485 | 29051.1 |
| mbl fold metallo-hydrolase | RAM_RS25200 | Not Available | Negative | 5546611 - 5547321 | 25574.3 |
| hypothetical protein | RAM_RS50420 | Not Available | Negative | 5547331 - 5548392 | 38344.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
