Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | RAM_RS02390 | Not Available | Positive | 470985 - 472028 | 37241.4 |
| lysophospholipid acyltransferase family protein | RAM_RS02395 | Not Available | Positive | 472106 - 473149 | 37351.6 |
| sensor histidine kinase | RAM_RS02400 | Not Available | Positive | 473205 - 474437 | 43525.9 |
| response regulator transcription factor | RAM_RS02405 | Not Available | Positive | 474425 - 475096 | 24192.2 |
| cpbp family intramembrane glutamic endopeptidase | RAM_RS02410 | Not Available | Negative | 475086 - 475985 | 33152.6 |
| had family hydrolase | RAM_RS02415 | Not Available | Negative | 476098 - 477015 | 32526.0 |
| duf5667 domain-containing protein | RAM_RS02420 | Not Available | Negative | 477100 - 478173 | 37227.1 |
| sigma-70 family rna polymerase sigma factor | RAM_RS02425 | Not Available | Negative | 478289 - 478981 | 25487.3 |
| long-chain-fatty-acid--coa ligase | RAM_RS02430 | Not Available | Positive | 479296 - 480807 | 52378.8 |
| glutaredoxin family protein | RAM_RS02435 | Not Available | Positive | 480826 - 481062 | 8810.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
