Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | RAM_RS24520 | Not Available | Negative | 5409137 - 5410162 | 35461.1 |
| pup--protein ligase | RAM_RS24525 | Not Available | Negative | 5410252 - 5411610 | 51150.6 |
| bifunctional phosphatase pap2/diacylglycerol kinase family protein | RAM_RS24530 | Not Available | Positive | 5411754 - 5413238 | 53143.7 |
| alpha/beta hydrolase | RAM_RS24535 | Not Available | Positive | 5413341 - 5414576 | 43299.4 |
| proteasome subunit alpha | RAM_RS24540 | Not Available | Negative | 5414891 - 5415685 | 28457.5 |
| proteasome subunit beta | RAM_RS24545 | Not Available | Negative | 5415738 - 5416592 | 29583.0 |
| ubiquitin-like protein pup | RAM_RS24550 | Not Available | Negative | 5416703 - 5416897 | 7100.86 |
| depupylase/deamidase dop | RAM_RS24555 | Not Available | Negative | 5416984 - 5418486 | 54873.8 |
| nudix domain-containing protein | RAM_RS24560 | Not Available | Positive | 5418528 - 5419046 | 19139.4 |
| hypothetical protein | RAM_RS24565 | Not Available | Negative | 5419037 - 5419639 | 19887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
