Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RAM_RS23685 | Not Available | Positive | 5192030 - 5193010 | 35232.3 |
| hypothetical protein | RAM_RS23690 | Not Available | Negative | 5193159 - 5193539 | 13961.6 |
| glycerophosphodiester phosphodiesterase | RAM_RS23695 | Not Available | Positive | 5193606 - 5194397 | 29083.2 |
| transglycosylase family protein | RAM_RS23700 | Not Available | Negative | 5194401 - 5195066 | 24001.6 |
| mfs transporter | RAM_RS23705 | Not Available | Positive | 5195309 - 5196709 | 49731.8 |
| thymidine kinase | RAM_RS23710 | Not Available | Positive | 5196731 - 5197492 | 27727.7 |
| rna polymerase-binding protein rbpa | RAM_RS23715 | Not Available | Positive | 5197718 - 5198065 | 13321.7 |
| nudix domain-containing protein | RAM_RS23720 | Not Available | Negative | 5198293 - 5198901 | 22368.2 |
| deor/glpr family dna-binding transcription regulator | RAM_RS23725 | Not Available | Positive | 5198950 - 5199699 | 25443.6 |
| pig-l deacetylase family protein | RAM_RS23730 | Not Available | Negative | 5199632 - 5200435 | 28982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
