Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase family protein | RAM_RS23500 | Not Available | Positive | 5161878 - 5162453 | 20989.7 |
| hypothetical protein | RAM_RS51120 | Not Available | Positive | 5162525 - 5162650 | 4528.33 |
| cgnr zinc finger domain-containing protein | RAM_RS23505 | Not Available | Negative | 5162647 - 5163156 | 18040.4 |
| hypothetical protein | RAM_RS49640 | Not Available | Positive | 5163182 - 5163346 | 6002.19 |
| site-specific integrase | RAM_RS23510 | Not Available | Negative | 5163348 - 5164382 | 37303.4 |
| alpha/beta fold hydrolase | RAM_RS23515 | Not Available | Negative | 5164392 - 5164874 | 16848.2 |
| ycii family protein | RAM_RS23520 | Not Available | Positive | 5164983 - 5165327 | 11931.3 |
| rna polymerase sigma factor | RAM_RS23525 | Not Available | Positive | 5165324 - 5166526 | 43406.3 |
| hypothetical protein | RAM_RS23530 | Not Available | Positive | 5166784 - 5167899 | 39338.4 |
| arsr/smtb family transcription factor | RAM_RS23535 | Not Available | Positive | 5167909 - 5168256 | 12873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
