Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | RAM_RS23300 | Not Available | Positive | 5115862 - 5116239 | 13659.2 |
| hypothetical protein | RAM_RS23305 | Not Available | Positive | 5116472 - 5116768 | 10482.5 |
| duf4360 domain-containing protein | RAM_RS23310 | Not Available | Positive | 5117014 - 5117643 | 22235.0 |
| fusc family protein | RAM_RS23315 | Not Available | Negative | 5117710 - 5119794 | 73971.3 |
| gh92 family glycosyl hydrolase | RAM_RS23320 | Not Available | Negative | 5119791 - 5122913 | 114925.0 |
| gh92 family glycosyl hydrolase | RAM_RS23325 | Not Available | Negative | 5123085 - 5127395 | 152717.0 |
| tannase/feruloyl esterase family alpha/beta hydrolase | RAM_RS23330 | Not Available | Positive | 5127545 - 5129176 | 57348.5 |
| class i sam-dependent methyltransferase | RAM_RS23335 | Not Available | Positive | 5129218 - 5129862 | 22971.9 |
| helix-turn-helix domain-containing protein | RAM_RS23340 | Not Available | Negative | 5129852 - 5130613 | 27757.1 |
| zinc-binding dehydrogenase | RAM_RS23345 | Not Available | Positive | 5130668 - 5131636 | 33712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
