Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| php domain-containing protein | RAM_RS23145 | Not Available | Negative | 5085462 - 5086298 | 30560.2 |
| non-homologous end-joining dna ligase | RAM_RS23150 | Not Available | Positive | 5086339 - 5087283 | 35644.8 |
| thiolase family protein | RAM_RS23155 | Not Available | Negative | 5087500 - 5088696 | 41306.2 |
| winged helix-turn-helix transcriptional regulator | RAM_RS23160 | Not Available | Positive | 5088827 - 5089267 | 16181.5 |
| cardb domain-containing protein | RAM_RS23165 | Not Available | Positive | 5089473 - 5093057 | 123629.0 |
| sdr family oxidoreductase | RAM_RS23170 | Not Available | Positive | 5093116 - 5093880 | 27101.5 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | RAM_RS23175 | Not Available | Positive | 5093977 - 5096292 | 83752.2 |
| doxx family protein | RAM_RS23180 | Not Available | Positive | 5096350 - 5096718 | 12613.1 |
| lysr family transcriptional regulator | RAM_RS23185 | Not Available | Positive | 5096733 - 5097614 | 32511.0 |
| had family hydrolase | RAM_RS23190 | Not Available | Positive | 5097611 - 5098279 | 24419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
