Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase family protein | RAM_RS22895 | Not Available | Negative | 5014498 - 5015010 | 17738.6 |
| hypothetical protein | RAM_RS22900 | Not Available | Negative | 5015027 - 5015446 | 15359.3 |
| dna polymerase iv | RAM_RS22905 | Not Available | Positive | 5015601 - 5016791 | 42482.5 |
| class i sam-dependent methyltransferase | RAM_RS22910 | Not Available | Negative | 5016801 - 5017682 | 31368.4 |
| histone-like nucleoid-structuring protein lsr2 | RAM_RS22915 | Not Available | Positive | 5017900 - 5018310 | 14722.1 |
| ofa family mfs transporter | RAM_RS22920 | Not Available | Positive | 5018901 - 5020199 | 44620.9 |
| metal-dependent hydrolase | RAM_RS22925 | Not Available | Positive | 5020201 - 5021034 | 28811.5 |
| lysr family transcriptional regulator | RAM_RS22930 | Not Available | Negative | 5021022 - 5021888 | 30073.2 |
| succinate--coa ligase subunit alpha | RAM_RS22935 | Not Available | Negative | 5021888 - 5022772 | 29728.7 |
| adp-forming succinate--coa ligase subunit beta | RAM_RS22940 | Not Available | Negative | 5022776 - 5023918 | 39171.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
