Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | RAM_RS22845 | Not Available | Positive | 5002839 - 5003870 | 36969.6 |
| tim-barrel domain-containing protein | RAM_RS22850 | Not Available | Positive | 5004128 - 5007346 | 112689.0 |
| duf305 domain-containing protein | RAM_RS22855 | Not Available | Negative | 5007406 - 5007942 | 18520.3 |
| duf1996 domain-containing protein | RAM_RS22860 | Not Available | Negative | 5007939 - 5008871 | 33393.1 |
| discoidin domain-containing protein | RAM_RS22865 | Not Available | Positive | 5009087 - 5010811 | 60810.0 |
| voc family protein | RAM_RS22870 | Not Available | Negative | 5010818 - 5011168 | 12111.2 |
| helix-turn-helix transcriptional regulator | RAM_RS22875 | Not Available | Positive | 5011257 - 5012081 | 29142.8 |
| hypothetical protein | RAM_RS22880 | Not Available | Positive | 5012305 - 5012739 | 16332.2 |
| hypothetical protein | RAM_RS22885 | Not Available | Positive | 5012772 - 5013350 | 20758.9 |
| hypothetical protein | RAM_RS22890 | Not Available | Positive | 5013360 - 5014442 | 38036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
