Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RAM_RS22795 | Not Available | Positive | 4992038 - 4993036 | 34400.9 |
| rhamnose abc transporter substrate-binding protein | RAM_RS22800 | Not Available | Positive | 4993042 - 4994103 | 36668.2 |
| l-rhamnose mutarotase | RAM_RS22805 | Not Available | Positive | 4994252 - 4994587 | 12857.1 |
| l-rhamnose isomerase | RAM_RS22810 | Not Available | Positive | 4994584 - 4995759 | 42888.8 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | RAM_RS22815 | Not Available | Positive | 4995762 - 4997780 | 70352.6 |
| l-fucose/l-arabinose isomerase family protein | RAM_RS22820 | Not Available | Positive | 4997797 - 4999218 | 50819.8 |
| rhamnulokinase | RAM_RS22825 | Not Available | Positive | 4999224 - 5000624 | 48767.2 |
| response regulator | RAM_RS22830 | Not Available | Negative | 5000658 - 5001266 | 21401.9 |
| sensor histidine kinase | RAM_RS22835 | Not Available | Negative | 5001263 - 5002333 | 36833.7 |
| hypothetical protein | RAM_RS22840 | Not Available | Negative | 5002340 - 5002723 | 13696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
