Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | RAM_RS22640 | Not Available | Positive | 4953024 - 4953848 | 29247.2 |
| glycosyl hydrolase 115 family protein | RAM_RS22645 | Not Available | Positive | 4953864 - 4956896 | 110398.0 |
| laci family dna-binding transcriptional regulator | RAM_RS22650 | Not Available | Negative | 4957076 - 4958146 | 38338.0 |
| endo-1,4-beta-xylanase | RAM_RS22655 | Not Available | Positive | 4958260 - 4959243 | 36554.0 |
| polysaccharide deacetylase family protein | RAM_RS22660 | Not Available | Negative | 4959233 - 4959775 | 19314.1 |
| acyl-coa desaturase | RAM_RS22665 | Not Available | Negative | 4959855 - 4960787 | 34400.7 |
| cold-shock protein | RAM_RS22670 | Not Available | Negative | 4961117 - 4961320 | 7219.41 |
| class i sam-dependent methyltransferase | RAM_RS22675 | Not Available | Negative | 4961421 - 4962686 | 46515.5 |
| fad-binding oxidoreductase | RAM_RS22680 | Not Available | Negative | 4962698 - 4964104 | 53805.1 |
| diviva domain-containing protein | RAM_RS22685 | Not Available | Negative | 4964205 - 4964744 | 19824.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
