Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | RAM_RS02145 | Not Available | Negative | 428736 - 429902 | 41689.0 |
| duf445 domain-containing protein | RAM_RS02150 | Not Available | Positive | 429932 - 431230 | 47765.6 |
| cgnr zinc finger domain-containing protein | RAM_RS02155 | Not Available | Negative | 431444 - 431905 | 16621.6 |
| voc family protein | RAM_RS02160 | Not Available | Positive | 431989 - 432357 | 13104.5 |
| zf-tfiib domain-containing protein | RAM_RS02165 | Not Available | Positive | 432365 - 432727 | 13509.8 |
| nucleoside kinase | RAM_RS02170 | Not Available | Positive | 432729 - 433340 | 22550.2 |
| methyltransferase domain-containing protein | RAM_RS02175 | Not Available | Negative | 433337 - 434518 | 42552.8 |
| helix-turn-helix domain-containing protein | RAM_RS02180 | Not Available | Positive | 434666 - 435085 | 14970.7 |
| membrane protein | RAM_RS02185 | Not Available | Positive | 435082 - 435771 | 24537.0 |
| duf2516 family protein | RAM_RS02190 | Not Available | Positive | 435856 - 436149 | 10586.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
