Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | RAM_RS22255 | Not Available | Positive | 4860803 - 4861936 | 39810.6 |
| gfo/idh/moca family protein | RAM_RS22260 | Not Available | Positive | 4861936 - 4863168 | 45247.3 |
| pmoa family protein | RAM_RS22265 | Not Available | Positive | 4863165 - 4864106 | 34337.1 |
| polysaccharide lyase family 1 protein | RAM_RS22270 | Not Available | Positive | 4864117 - 4865403 | 45894.7 |
| pectate lyase | RAM_RS22275 | Not Available | Positive | 4865642 - 4866412 | 26724.5 |
| pectinesterase family protein | RAM_RS22280 | Not Available | Positive | 4866480 - 4867508 | 35317.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | RAM_RS22285 | Not Available | Positive | 4867644 - 4868630 | 35629.8 |
| beta-galactosidase | RAM_RS22290 | Not Available | Positive | 4868675 - 4871563 | 102032.0 |
| stas domain-containing protein | RAM_RS22295 | Not Available | Positive | 4871725 - 4872087 | 12510.5 |
| afsr/sarp family transcriptional regulator | RAM_RS22300 | Not Available | Negative | 4872074 - 4874194 | 74715.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
