Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | RAM_RS22105 | Not Available | Positive | 4824095 - 4824772 | 24275.8 |
| l-arabinose isomerase | RAM_RS22110 | Not Available | Positive | 4824790 - 4826289 | 53645.0 |
| multiple monosaccharide abc transporter substrate-binding protein | RAM_RS22115 | Not Available | Positive | 4826319 - 4827425 | 39022.4 |
| multiple monosaccharide abc transporter atp-binding protein | RAM_RS22120 | Not Available | Positive | 4827422 - 4828942 | 55543.8 |
| multiple monosaccharide abc transporter permease | RAM_RS22125 | Not Available | Positive | 4828939 - 4830159 | 42072.8 |
| duf1996 domain-containing protein | RAM_RS22130 | Not Available | Negative | 4830396 - 4831841 | 51733.6 |
| substrate-binding domain-containing protein | RAM_RS22135 | Not Available | Positive | 4832091 - 4832924 | 28712.2 |
| cytochrome p450 | RAM_RS22140 | Not Available | Negative | 4833060 - 4834283 | 44506.3 |
| glycerol kinase glpk | RAM_RS22145 | Not Available | Negative | 4834380 - 4836329 | 71036.8 |
| iclr family transcriptional regulator | RAM_RS22150 | Not Available | Negative | 4836340 - 4837107 | 26708.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
