Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | RAM_RS21960 | Not Available | Negative | 4788046 - 4788396 | 13371.4 |
| duf1996 domain-containing protein | RAM_RS21965 | Not Available | Negative | 4788457 - 4789887 | 51346.2 |
| metal-dependent hydrolase | RAM_RS50385 | Not Available | Negative | 4790569 - 4790880 | 10643.1 |
| sigma-70 family rna polymerase sigma factor | RAM_RS21970 | Not Available | Negative | 4790887 - 4791504 | 21838.0 |
| pyridoxamine 5'-phosphate oxidase family protein | RAM_RS21975 | Not Available | Positive | 4791746 - 4792153 | 14284.2 |
| gaf domain-containing sensor histidine kinase | RAM_RS21980 | Not Available | Positive | 4792320 - 4793822 | 52940.1 |
| response regulator | RAM_RS21985 | Not Available | Positive | 4793819 - 4794478 | 23597.4 |
| hypothetical protein | RAM_RS21990 | Not Available | Positive | 4794588 - 4795022 | 15739.5 |
| duf1772 domain-containing protein | RAM_RS21995 | Not Available | Negative | 4795141 - 4795593 | 15941.1 |
| tetr/acrr family transcriptional regulator | RAM_RS22000 | Not Available | Positive | 4795653 - 4796339 | 24707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
