Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methane monooxygenase | RAM_RS21715 | Not Available | Positive | 4727309 - 4728958 | 64273.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | RAM_RS21720 | Not Available | Positive | 4728975 - 4730003 | 37899.0 |
| toluene hydroxylase | RAM_RS21725 | Not Available | Positive | 4730012 - 4731181 | 44240.5 |
| propane 2-monooxygenase effector subunit mimd | RAM_RS21730 | Not Available | Positive | 4731178 - 4731549 | 13651.0 |
| amidohydrolase family protein | RAM_RS21735 | Not Available | Positive | 4731585 - 4732622 | 39552.6 |
| iron-sulfur cluster assembly protein | RAM_RS21740 | Not Available | Positive | 4732619 - 4733317 | 24780.5 |
| nad(p)-dependent alcohol dehydrogenase | RAM_RS21745 | Not Available | Positive | 4733314 - 4734339 | 35878.8 |
| chaperonin groel | RAM_RS21750 | Not Available | Positive | 4734351 - 4736042 | 59246.1 |
| toll/interleukin-1 receptor domain-containing protein | RAM_RS21755 | Not Available | Negative | 4736129 - 4737604 | 53183.0 |
| helix-turn-helix domain-containing protein | RAM_RS21760 | Not Available | Positive | 4737788 - 4741324 | 129164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
